6ft - 6-frame translation of a DNA sequence into protein
[ -rs ] seq-library-file
translates all six reading frames of a double-stranded DNA sequence
into individual protein sequences. Stop codons are represented by character
contains one or several sequences in
This program may be used for searching genomic or EST sequence databases with a
protein profile. Better results are usually obtained by first converting the
protein profile into a frame-search profile, and then searching a 2-frame
translation of the DNA sequence database generated with pftools program
manual pages of pftool programs ptof
- Translate only reversed (antisense) strand.
- Translate only sense strand.
manual pages of pftools program ptof.