ImageSetStatistics - part of ANTS registration suite
Usage: ImageSetStatistics ImageDimension controlslist.txt outimage.nii whichstat
- whichstat = 0:
- median, 1: max prob appearance , 2: weighted mean
appearance , 3: trimmed mean , 4 : max value , option 5 :
similarity-weighted (must pass imagelist2 as well) else median , option 6
: same as similarity-weighted option 5 but the label corresponds to the
image that provides the best local match ... useful if you want to MRF
smooth these indices , option 7 : similar to 5 but expects the max-value
to be stored in the ROI image and uses it to get the intensity ...
- ImageSetStatistics 3 imagelist.txt maxvalueimage.nii.gz
- similarity weighted --- pass in a list of similarity
images here which will be used to select the best label --- thus,
number of similarity images must match the number of label images .