Jelly - genome assembly upgrading tool
PBJelly is a highly automated pipeline that aligns long sequencing reads (such
as PacBio RS reads or long 454 reads in fasta format) to high-confidence draft
assembles. PBJelly fills or reduces as many captured gaps as possible to
produce upgraded draft genomes.
For a complete description, see the help menu
- -h, --help
- Show summary of options.