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Jelly - genome assembly upgrading tool

JELLY(1) General Commands Manual JELLY(1)

NAME

Jelly - genome assembly upgrading tool

DESCRIPTION

PBJelly is a highly automated pipeline that aligns long sequencing reads (such as PacBio RS reads or long 454 reads in fasta format) to high-confidence draft assembles. PBJelly fills or reduces as many captured gaps as possible to produce upgraded draft genomes.

OPTIONS

For a complete description, see the help menu
-h, --help
Show summary of options.

SEE ALSO

/usr/share/doc/pbjelly/JellyReadme.txt
February 2016 Debian Sid