Man pages sections > man1 > OrthancWSIDicomToTiff

OrthancWSIDicomToTiff - Whole-slide imaging support for Orthanc

ORTHANCWSIDICOMTOTIFF(1) User Commands ORTHANCWSIDICOMTOTIFF(1)

NAME

OrthancWSIDicomToTiff - Whole-slide imaging support for Orthanc

SYNOPSIS

OrthancWSIDicomToTiff [ OPTION]... [INPUT] [OUTPUT]

DESCRIPTION

Orthanc, lightweight, RESTful DICOM server for healthcare and medical research.
Convert a DICOM image for digital pathology stored in some Orthanc server as a standard hierarchical TIFF (whose tiles are all encoded using JPEG).

Generic options:

--help
Display this help and exit
--version
Output version information and exit
--verbose
Be verbose in logs

Options for the source DICOM image:

--orthanc arg (=http://localhost:8042/)
URL to the REST API of the target Orthanc server
--username arg
Username for the target Orthanc server
--password arg
Password for the target Orthanc server

Options for the target TIFF image:

--color arg
Color of the background for missing tiles (e.g. "255,0,0")
--reencode arg
Whether to re-encode each tile in JPEG (no transcoding, much slower) (Boolean)
--jpeg-quality arg
Set quality level for JPEG (0..100)

AUTHOR

Written by Sebastien Jodogne <s.jodogne@gmail.com> Copyright © 2012-2016 Sebastien Jodogne, Medical Physics Department, University Hospital of Liege (Belgium)
 
Copyright © 2017 Osimis S.A. (Belgium) Licensing AGPL: GNU AGPL version 3 or later <http://gnu.org/licenses/agpl.html>.
 
This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law.
March 2017 OrthancWSIDicomToTiff 0.4