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abyss-tofastq - convert various file formats to FASTQ format

abyss-tofastq(1) User Commands abyss-tofastq(1)

NAME

abyss-tofastq - convert various file formats to FASTQ format
 
abyss-tofasta - convert various file formats to FASTA format

SYNOPSIS

abyss-tofastq [FILE]...
 
or
 
abyss-tofasta [FILE]...

DESCRIPTION

Convert the input files to FASTA or FASTQ format. FILE may be in FASTA, FASTQ, qseq, export, SRA, SAM or BAM format and may be compressed with gz, bz2 or xz and may be tarred.

AUTHOR

Written by Shaun Jackman.

REPORTING BUGS

Report bugs to <abyss-users@bcgsc.ca>. Copyright 2015 Canada's Michael Smith Genome Sciences Centre
2015-May ABySS 2.0.2