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asn2idx - index ASN.1 Bioseq-sets for fast access to individual sequences

ASN2IDX(1) NCBI Tools User's Manual ASN2IDX(1)

NAME

asn2idx - index ASN.1 Bioseq-sets for fast access to individual sequences

SYNOPSIS

asn2idx [ -] [ -b] [ -d dir] [ -f  filter] -p path [ -r  path] [ -t] [ -x str]

DESCRIPTION

asn2idx indexes ASN.1 Bioseq-sets (such as GenBank release files) to speed retrieval of the individual sequences they contain. For each file that it processes, it yields an output file in the same directory with the extension .idx.

OPTIONS

A summary of options is included below.
-
Print usage message
-b
Bioseq-sets are Binary
-d dir
Required Subdirectory
-f filter
Filter (default = gbcon,gbest,gbgss,gbhtg,gbsts)
-p path
Path to Files
-p path
Path for Results
-t
Recurse
-x str
File Selection Substring (default = .aso)

AUTHOR

The National Center for Biotechnology Information.

SEE ALSO

asn2asn(1), asndhuff(1).
2008-12-13 NCBI