Man pages sections > man1 > blast_top_hits

blast_top_hits - reduces a blast or blat output file to the top hit for each

BLAST_TOP_HITS(1) User Commands BLAST_TOP_HITS(1)

NAME

blast_top_hits - reduces a blast or blat output file to the top hit for each query sequence only

SYNOPSIS

blast_top_hits --input blast_out --mode blast <options>

DESCRIPTION

Reduces a blast or blat output file to the top hit for each query sequence only.
This program belongs to seer(1) (Sequence Element (kmer) Enrichment Analysis).

OPTIONS

Required

--input
BLAST output file in -m 6/-outfmt 6 or BLAT .psl file
--mode
Either blast or blat

Optional

--full_query
The entire query must be reported as a match to appear in the output
-h, --help
Shows this help.

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.
March 2017 blast_top_hits 1.1.2