Man pages sections > man1 > bppalnoptim

bppalnoptim - Sequence alignment optimization according to the number of

BPPALNOPTIM(1) General Commands Manual BPPALNOPTIM(1)

NAME

bppalnoptim - Sequence alignment optimization according to the number of sequences vs. number of sites trade-off
 

SYNOPSIS

bppalnoptim [options]
 

AVAILABILITY

All UNIX flavors
 

DESCRIPTION

bppalnoptim samples sequences from an alignment in order to maximize the number of sites with a given minimal coverage.
 

OPTIONS

You should refer to 'info physamp' or to the online manual of physamp for a complete list of available options.
 
--noninteractive=yes
 
generates output for redirection into a file.
 
param=file
 
reads a file for loading options
 

AUTHOR

Julien Y. Dutheil.
LOCAL Debian Sid