Man pages sections > man1 > cirdna

cirdna - Draws circular maps of DNA constructs

CIRDNA(1e) EMBOSS Manual for Debian CIRDNA(1e)

NAME

cirdna - Draws circular maps of DNA constructs

SYNOPSIS

cirdna -infile infile [-maxgroups integer] [-maxlabels  integer] -ruler boolean -blocktype list [ -originangle  float] -posticks  selection -posblocks  selection [-intersymbol boolean] [-intercolour  integer] [-interticks  boolean] [-gapsize  integer] [-ticklines  boolean] [-textheight float] [-textlength  float] [-tickheight float] [-blockheight float] [-rangeheight float] [-gapgroup  float] [-postext float] -graphout graph
cirdna -help

DESCRIPTION

cirdna is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Display" command group(s).

OPTIONS

Input section

-infile infile
Default value: inputfile

Additional section

-maxgroups integer
Default value: 20
-maxlabels integer
Default value: 10000

Output section

-ruler boolean
Default value: Y
-blocktype list
Default value: Filled
-originangle float
Default value: 90
-posticks selection
Default value: Out
-posblocks selection
Default value: In
-intersymbol boolean
Default value: Y
-intercolour integer
Default value: 1
-interticks boolean
Default value: N
-gapsize integer
Default value: 500
-ticklines boolean
Default value: N
-textheight float
Height of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0
-textlength float
Length of text. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0
-tickheight float
Height of ticks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0
-blockheight float
Height of blocks. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0
-rangeheight float
Height of range ends. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0
-gapgroup float
Space between groups. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0
-postext float
Space between text and ticks, blocks, and ranges. Enter a number <1.0 or >1.0 to decrease or increase the size, respectively Default value: 1.0
-graphout graph

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

cirdna is fully documented via the tfm(1) system.

AUTHOR

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Wrote the script used to autogenerate this manual page.
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
 
05/11/2012 EMBOSS 6.4.0