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mat2dof - Matrix to degrees of freedom

mat2dof(1) The Computational Morphometry Toolkit mat2dof(1)

NAME

mat2dof - Matrix to degrees of freedom

SYNOPSIS

mat2dof [options] < matrix

DESCRIPTION

Convert transformation matrix to degrees of freedom

OPTIONS

Global Toolkit Options (these are shared by all CMTK tools)

--help
Write list of basic command line options to standard output.
--help-all
Write complete list of basic and advanced command line options to standard output.
--wiki
Write list of command line options to standard output in MediaWiki markup.
--man
Write man page source in 'nroff' markup to standard output.
--version
Write toolkit version to standard output.
--echo
Write the current command line to standard output.
--verbose-level <integer>
Set verbosity level.
--verbose, -v
Increment verbosity level by 1 (deprecated; supported for backward compatibility).
--threads <integer>
Set maximum number of parallel threads (for POSIX threads and OpenMP).

Input Options

--matrix3x3, -3
Only input upper left 3x3 submatrix.
--transpose, -t
Transpose input matrix.
--pixel-size <string>
For matrices in pixel space (i.e., mapping from grid index to physical coordinate), set image grid pixel size. [Default: NONE]

Transformation Modifiers

--center <string>
Set center x,y,z for rotation and scaling. [Default: NONE]
--offset <string>
Set offset dx,dy,dz for translation. [Default: NONE]
--xlate <string>
Translate result relative by given vector. [Default: NONE]
--inverse
Output inverse transformation. Inversion happens after all other modifiers have been applied.

Output Options

--output <string>, -o <string>
Write output transformation to this file [Default: NONE]
--list <string>
Write output in list format to this archive (directory including 'registration' and 'studylist' files). [Default: NONE]
--append
Append to output file rather than create a new one and overwrite exisiting files.

AUTHORS

Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko

LICENSE

http://www.fsf.org/licensing/licenses/gpl.html

BUGS

Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.
Sep 11 2017 CMTK 3.3.1