Man pages sections > man1 > cmtk-split

split - Split images

split(1) The Computational Morphometry Toolkit split(1)

NAME

split - Split images

SYNOPSIS

split InputImage OutputImagePattern

DESCRIPTION

Split volume image into sub-images, i.e., to separate interleaved images into passes

OPTIONS

Global Toolkit Options (these are shared by all CMTK tools)

--help
Write list of basic command line options to standard output.
--help-all
Write complete list of basic and advanced command line options to standard output.
--wiki
Write list of command line options to standard output in MediaWiki markup.
--man
Write man page source in 'nroff' markup to standard output.
--version
Write toolkit version to standard output.
--echo
Write the current command line to standard output.
--verbose-level <integer>
Set verbosity level.
--verbose, -v
Increment verbosity level by 1 (deprecated; supported for backward compatibility).
--threads <integer>
Set maximum number of parallel threads (for POSIX threads and OpenMP).

Orientation Options

--slice-orientation
Define slice axis for splitting. Supported values: "axial", "sagittal", "coronal", "interleave-x", "interleave-y", "interleave-z", where the default is "axial", or use one of the following:
--axial, -a
Interleaved axial images [This is the default]
--sagittal, -s
Interleaved sagittal images
--coronal, -c
Interleaved coronal images
--interleave-x, -x
Interleaved along x axis
--interleave-y, -y
Interleaved along y axis
--interleave-z, -z
Interleaved along z axis [This is the default]

Splitting Options

--factor <integer>, -f <integer>
Interleave factor. This is the number of subimages generated. If this is set to zero, a separate 2D output image is generated for each slice in the input (in the given slice orientation). [Default: 2]

Output Options

--padded, -p
Padded output, i.e., fill in removed slices
--output-xform-path <string>
Optional path template (fprintf-style) for output affine transformation that maps input image coordinates to each output image. [Default: NONE]

AUTHORS

Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko

LICENSE

http://www.fsf.org/licensing/licenses/gpl.html

BUGS

Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.
Sep 11 2017 CMTK 3.3.1