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combineKmers - basic algorithm to combine kmer counts across samples

COMBINEKMERS(1) User Commands COMBINEKMERS(1)

NAME

combineKmers - basic algorithm to combine kmer counts across samples
This program belongs to seer(1) (Sequence Element (kmer) Enrichment Analysis).

DESCRIPTION

Basic algorithm to combine kmer counts across samples

OPTIONS

Required options:

-r [ --samples ] arg
file with tab separated sample name and kmer file
-o [ --output ] arg
output file prefix

Other options:

--min_samples arg (=1)
minimum number of samples kmer must occur in to be printed
-h [ --help ]
full help message

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.
March 2017 combineKmers 1.1.2