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coordinateTranslate - part of mauveAligner package

COORDINATETRANSLATE(1) User Commands COORDINATETRANSLATE(1)

NAME

coordinateTranslate - part of mauveAligner package

SYNOPSIS

coordinateTranslate <XMFA alignment> <alignment coordinate file>

DESCRIPTION

Alignment coordinate file should be structured into 2 tab-delimited columns: <block ID> <column> Output will be the nearest aligned position for each genome in the block, with 0 entries for genomes undefined in the block
April 2015 coordinateTranslate 1.2.0+4713