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coves - produce individual RNA structure predictions for sequences

COVES(1) General Commands Manual COVES(1)

NAME

coves - produce individual RNA structure predictions for sequences

DESCRIPTION

This command computes the score of each whole sequence individually, and prints the scores. You might use it to detect sequences which, according to the model, don't belong to the same structural consensus; sequences which don't fit the model get negative scores.
 

EXAMPLES

coves mymodel.cm seqs.fa
 
coves -s mymodel.cm seqs.fa
 
coves -m mymodel.cm seqs.fa
 

SEE ALSO

tRNAscan-SE(1), /usr/share/doc/trnascan-se/MANUAL.gz
October 2015 Debian Sid