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crb-blast - Conditional Reciprocal Best BLAST

CRB-BLAST(1) User Commands CRB-BLAST(1)

NAME

crb-blast - Conditional Reciprocal Best BLAST

DESCRIPTION

CRB-Blast v0.6.8 by Chris Boursnell <cmb211@cam.ac.uk>
Conditional Reciprocal Best BLAST
USAGE: crb-blast <options>

OPTIONS:

--query, -q <s>:
query fasta file
--target, -t <s>:
target fasta file
--evalue, -e <f>:
e-value cut off for BLAST. Format 1e-5 (default: 1.0e-05)
--threads, -h <i>:
number of threads to run BLAST with (default: 1)
--output, -o <s>:
output file as tsv
--split, -s:
split the fasta files into chunks and run multiple blast jobs and then combine them.
--verbose, -v:
be verbose
--version, -r:
Print version and exit
--help, -l:
Show this message
December 2016 crb-blast 0.6.8