Man pages sections > man1 > csg_gmxtopol

csg_gmxtopol - Part of the VOTCA package

csg_gmxtopol(1) General Commands Manual csg_gmxtopol(1)

NAME

csg_gmxtopol - Part of the VOTCA package
 

SYNOPSIS

csg_gmxtopol [OPTION] [OPTIONPARAMETERS]
 

DESCRIPTION

Create skeleton for gromacs topology based on atomistic topology and a mapping file. File still needs to be modified by the user.
 
Please visit the program site at __http://www.votca.org__.
 

OPTIONS

Allowed options:
 
-h [ --help ]
display this help and exit
-v [ --verbose ]
be loud and noisy
--top arg
atomistic topology file
--out arg
output topology (will create .top and in future also .itp)
 
Mapping options:
 
--cg arg
coarse graining mapping and bond definitions (xml-file)
--map-ignore arg
list of molecules to ignore separated by ;
--no-map
disable mapping and act on original trajectory
 

AUTHORS

Written and maintained by the VOTCA Development Team <devs@votca.org>
 
This Manual Page was converted from t2t format to the this format by txt2tags (http://txt2tags.org) ! The t2t file was extracted from 'csg_gmxtopol --help' by help2t2t (version 1.3 )
 
Copyright 2009-2011 The VOTCA Development Team (http://www.votca.org)
 
Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at
 

http://www.apache.org/licenses/LICENSE-2.0
 
Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.
 
Thu Dec 1 14:48:56 UTC 2016 Version: 1.3