Man pages sections > man1 > dbigcg

dbigcg - Index a GCG formatted database

DBIGCG(1e) EMBOSS Manual for Debian DBIGCG(1e)

NAME

dbigcg - Index a GCG formatted database

SYNOPSIS

dbigcg -dbname string -idformat list -directory directory -filenames  string -release string -date string -fields list -exclude string -maxindex integer -sortoptions  string -systemsort  boolean -cleanup  boolean -outfile outfile -indexoutdir  outdir
dbigcg -help

DESCRIPTION

dbigcg is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Utils:Database indexing" command group(s).

OPTIONS

Input section

-dbname string
-idformat list
Default value: EMBL
-directory directory
Default value: .
-filenames string
Default value: *.seq

Required section

-release string
Default value: 0.0
-date string
Default value: 00/00/00

Advanced section

-fields list
Default value: acc
-exclude string
-maxindex integer
-sortoptions string
Sort options, typically '-T .' to use current directory for work files and '-k 1,1' to force GNU sort to use the first field Default value: -T . -k 1,1
-systemsort boolean
Default value: Y
-cleanup boolean
Default value: Y

Output section

-outfile outfile
-indexoutdir outdir
Default value: .

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

dbigcg is fully documented via the tfm(1) system.

AUTHOR

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Wrote the script used to autogenerate this manual page.
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
 
05/11/2012 EMBOSS 6.4.0