Man pages sections > man1 > dbxfasta

dbxfasta - Index a fasta file database using b+tree indices

DBXFASTA(1e) EMBOSS Manual for Debian DBXFASTA(1e)


dbxfasta - Index a fasta file database using b+tree indices


dbxfasta -dbname string -dbresource string -idformat list -directory directory -filenames  string -fields list -compressed boolean -release string -date string -exclude string -indexoutdir outdir -outfile outfile
dbxfasta -help


dbxfasta is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Utils:Database indexing" command group(s).


Input section

-dbname string
-dbresource string
-idformat list
Default value: idacc
-directory directory
Default value: .
-filenames string
Default value: *.fasta

Required section

-fields list
Default value: id,acc
-compressed boolean
Default value: Y

Advanced section

-release string
Default value: 0.0
-date string
Default value: 00/00/00
-exclude string

Output section

-indexoutdir outdir
Default value: .
-outfile outfile


Bugs can be reported to the Debian Bug Tracking system (, or directly to the EMBOSS developers (


dbxfasta is fully documented via the tfm(1) system.


Debian Med Packaging Team <>
Wrote the script used to autogenerate this manual page.
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
05/11/2012 EMBOSS 6.4.0