Man pages sections > man1 > fastaq-enumerate_names

fastaq_enumerate_names - Renames sequences in a file, calling them 1,2,3... etc

FASTAQ-ENUMERATE_NAMES(1) User Commands FASTAQ-ENUMERATE_NAMES(1)

NAME

fastaq_enumerate_names - Renames sequences in a file, calling them 1,2,3... etc

DESCRIPTION

usage: fastaq_enumerate_names [options] <infile> <outfile>
Renames sequences in a file, calling them 1,2,3... etc

positional arguments:

infile
Name of fasta/q file to be read
outfile
Name of output fasta/q file

optional arguments:

-h, --help
show this help message and exit
--start_index START_INDEX
Starting number [1]
--rename_file RENAME_FILE
If used, will write a file of old name to new name
--keep_suffix
Use this to keep a /1 or /2 suffix at the end of each name
--suffix SUFFIX
Add the given string to the end of every name
June 2017 fastaq 3.15.0