Man pages sections > man1 > fastaq-expand_nucleotides

fastaq_expand_nucleotides - Makes every combination of degenerate nucleotides

FASTAQ-EXPAND_NUCLEOTIDES(1) User Commands FASTAQ-EXPAND_NUCLEOTIDES(1)

NAME

fastaq_expand_nucleotides - Makes every combination of degenerate nucleotides

DESCRIPTION

usage: fastaq_expand_nucleotides <infile> <outfile>
Makes all combinations of sequences in input file by using all possibilities of redundant bases. e.g. ART could be AAT or AGT. Assumes input is nucleotides, not amino acids

positional arguments:

infile
Name of input file
outfile
Name of output file

optional arguments:

-h, --help
show this help message and exit
June 2017 fastaq 3.15.0