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fastaq_to_orfs_gff - Writes a GFF file of open reading frames

FASTAQ-TO_ORFS_GFF(1) User Commands FASTAQ-TO_ORFS_GFF(1)

NAME

fastaq_to_orfs_gff - Writes a GFF file of open reading frames

DESCRIPTION

usage: fastaq_to_orfs_gff [options] <infile> <outfile>
Writes a GFF file of open reading frames from a sequence file

positional arguments:

infile
Name of input file
outfile
Name of output GFF file

optional arguments:

-h, --help
show this help message and exit
--min_length INT
Minimum length of ORF, in nucleotides [300]
June 2017 fastaq 3.15.0