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fastautils - FASTA format file manipulation utilities

fastautils(1) FASTA format file manipulation utilities fastautils(1)

NAME

fastautils - FASTA format file manipulation utilities
 

SYNOPSIS

fastachecksum [ options ] <input file>
fastaclean
fastaclip
fastacomposition
fastadiff
fastaexplode
fastafetch
fastahardmask
fastaindex
fastalength
fastanrdb
fastaoverlap
fastareformat
fastaremove
fastarevcomp
fastasoftmask
fastasort
fastasplit
fastasubseq
fastatranslate
fastavalidcds

DESCRIPTION

These are utilities for the manipulation of FASTA format sequence databases which are distributed with the exonerate sequence alignment program.

ENVIRONMENT

Not documented yet.

EXAMPLES

fastalength sequence.fasta
blah blah

VERSION

This documentation accompanies version 2.2.0 of the exonerate package.

AUTHOR

Guy St.C. Slater. <guy@ebi.ac.uk>.
See the AUTHORS file accompanying the source code for a list of contributors.

AVAILABILITY

This source code for the exonerate package is available under the terms of the GNU general public licence.
 
Please see the file COPYING which was distrubuted with this package, or http://www.gnu.org/licenses/gpl.txt for details.
 
This package has been developed as part of the ensembl project. Please see http://www.ensembl.org/ for more information.

SEE ALSO

exonerate(1),e-PCR
March 2003 fastautils