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fdnacomp - DNA compatibility algorithm

FDNACOMP(1e) EMBOSS Manual for Debian FDNACOMP(1e)


fdnacomp - DNA compatibility algorithm


fdnacomp -sequence seqsetall -intreefile  tree -weights properties [-outgrno  integer] -njumble integer -seed integer -outfile outfile [ -trout toggle] -outtreefile outfile [-printdata  boolean] [-progress  boolean] [-treeprint  boolean] [-stepbox  boolean] [-ancseq boolean]
fdnacomp -help


fdnacomp is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Phylogeny:Molecular sequence" command group(s).


Input section

-sequence seqsetall
File containing one or more sequence alignments
-intreefile tree
-weights properties

Additional section

-outgrno integer
-njumble integer
-seed integer
Default value: 1

Output section

-outfile outfile
-trout toggle
Default value: Y
-outtreefile outfile
-printdata boolean
Default value: N
-progress boolean
Default value: Y
-treeprint boolean
Default value: Y
-stepbox boolean
Default value: N
-ancseq boolean
Default value: N


Bugs can be reported to the Debian Bug Tracking system (, or directly to the EMBOSS developers (


fdnacomp is fully documented via the tfm(1) system.


Debian Med Packaging Team <>
Wrote the script used to autogenerate this manual page.
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
08/11/2010 PHYLIPNEW 3.69+20100721