Man pages sections > man1 > frestdist

frestdist - Distance matrix from restriction sites or fragments

FRESTDIST(1e) EMBOSS Manual for Debian FRESTDIST(1e)

NAME

frestdist - Distance matrix from restriction sites or fragments

SYNOPSIS

frestdist -data discretestates [-restsites  boolean] [-neili  boolean] -gamma boolean -gammacoefficient  float [-ttratio float] [-sitelength  integer] [-lower  boolean] -outfile outfile [-printdata boolean] [-progress  boolean]
frestdist -help

DESCRIPTION

frestdist is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Phylogeny:Molecular sequence" command group(s).

OPTIONS

Input section

-data discretestates
File containing one or more sets of restriction data

Additional section

-restsites boolean
Default value: Y
-neili boolean
Default value: N
-gamma boolean
Default value: N
-gammacoefficient float
Default value: 1
-ttratio float
Default value: 2.0
-sitelength integer
Default value: 6
-lower boolean
Default value: N

Output section

-outfile outfile
-printdata boolean
Default value: N
-progress boolean
Default value: Y

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

frestdist is fully documented via the tfm(1) system.

AUTHOR

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Wrote the script used to autogenerate this manual page.
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
 
08/11/2010 PHYLIPNEW 3.69+20100721