Man pages sections > man1 > frestml

frestml - Restriction site maximum Likelihood method

FRESTML(1e) EMBOSS Manual for Debian FRESTML(1e)

NAME

frestml - Restriction site maximum Likelihood method

SYNOPSIS

frestml -data discretestates [-weights  properties] -intreefile tree [-njumble integer] -seed integer [ -outgrno integer] [ -allsites  boolean] -lengths boolean [-sitelength  integer] -global  boolean -rough boolean -outfile outfile [ -trout toggle] -outtreefile outfile [-printdata  boolean] [-progress  boolean] [-treeprint  boolean]
frestml -help

DESCRIPTION

frestml is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Phylogeny:Molecular sequence" command group(s).

OPTIONS

Input section

-data discretestates
File containing one or more sets of restriction data
-weights properties
Weights file
-intreefile tree

Additional section

-njumble integer
-seed integer
Default value: 1
-outgrno integer
-allsites boolean
Default value: Y
-lengths boolean
Default value: N
-sitelength integer
Default value: 6
-global boolean
Default value: N
-rough boolean
Default value: Y

Output section

-outfile outfile
-trout toggle
Default value: Y
-outtreefile outfile
-printdata boolean
Default value: N
-progress boolean
Default value: Y
-treeprint boolean
Default value: Y

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

frestml is fully documented via the tfm(1) system.

AUTHOR

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Wrote the script used to autogenerate this manual page.
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
 
08/11/2010 PHYLIPNEW 3.69+20100721