Man pages sections > man1 > gmx-wheel

gmx-wheel - Plot helical wheels

GMX-WHEEL(1) GROMACS GMX-WHEEL(1)

NAME

gmx-wheel - Plot helical wheels

SYNOPSIS

 
gmx wheel [ -f [<.dat>]] [-o [<.eps>]] [-r0 <int>] [-rot0 <real>]
          [ -T <string>] [-[no]nn]


DESCRIPTION

gmx wheel plots a helical wheel representation of your sequence. The input sequence is in the .dat file where the first line contains the number of residues and each consecutive line contains a residue name.

OPTIONS

Options to specify input files:
-f [<.dat>] (nnnice.dat)
Generic data file

 
Options to specify output files:
-o [<.eps>] (plot.eps)
Encapsulated PostScript (tm) file

 
Other options:
-r0 <int> (1)
The first residue number in the sequence
-rot0 <real> (0)
Rotate around an angle initially (90 degrees makes sense)
-T <string>
Plot a title in the center of the wheel (must be shorter than 10 characters, or it will overwrite the wheel)
-[no]nn (yes)
Toggle numbers

SEE ALSO

gmx(1)
 
More information about GROMACS is available at < http://www.gromacs.org/>. 2017, GROMACS development team
September 15, 2017 2016.4