Man pages sections > man3 > Bio::Roary::CombinedProteome

Bio::Roary::CombinedProteome - Take in multiple FASTA sequences containing

Bio::Roary::CombinedProteome(3pm) User Contributed Perl Documentation Bio::Roary::CombinedProteome(3pm)

NAME

Bio::Roary::CombinedProteome - Take in multiple FASTA sequences containing proteomes and concat them together and output a FASTA file, filtering out more than 5% X's

VERSION

version 3.11.0

SYNOPSIS

Take in multiple FASTA sequences containing proteomes and concat them together and output a FASTA file, filtering out more than 5% X's
use Bio::Roary::CombinedProteome;
   my $obj = Bio::Roary::CombinedProteome->new(
     proteome_files   => ['abc.fa','efg.fa'],
     output_filename   => 'example_output.fa',
     maximum_percentage_of_unknowns => 5.0,
   );
   $obj->create_combined_proteome_file;

AUTHOR

Andrew J. Page <ap13@sanger.ac.uk> This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
  The GNU General Public License, Version 3, June 2007
2017-10-11 perl v5.26.0